Welcome to my webpage!
Russell W. Hanson
Cambridge, MA 02139
Tel. +1-617-500-3349
Email: Russell
russell.hanson ,, gmail com
http://hansonr.org
CV
Russell Hanson's CV
Lab/Wiki
Teaching
I was a TF for Chemistry 201, and the course handouts can't still be downloaded from:
CH201.html
Presentations and Talks
- April 24, 2009 Dana-Farber Cancer Institute Boston: Using the Weighted Histogram Analysis Method (WHAM) in cancer biology and the Yeast Protein Databank (YPD); Latent Dirichlet Analysis (LDA) for biological sequences and structures
[ppt] [pdf]
- December 8, 2008 Recommendation Engines; Collaborative Filtering; Thematic clustering of large text corpora; Infinite Markov model for statistical NLP [pdf]
- June 27, 2007 Transition path sampling and Supersymmetricmoleculardynamics (TPSSuSyMD) [pdf]
- December 27, 2004 21C3 Berlin: Vorträge und Workshops: Hacking The Genome
[ppt] [pdf]
- December 1, 2004 Mechanical Engineering 6629 Intro. MEMS Final Group Presentation - MEM Therapeutic Systems (MEMTS)
- October 1, 2004 Biology Graduate Student Symposium, Monte Carlo study of DNA condensation phenomena [ppt] [pdf]
- July 20, 2004 GT Molecular Simulations Discussion Group Russell talks about GRC Computational Chemistry 2004 [ppt] [pdf]
- June 8, 2004 GT Molecular Simulations Discussion Group Normal Mode Analysis of Macromolecules - Expanded Version
- April 29, 2004 BIOL 8804b Molecular Modeling Dynamical properties of the calcium pump of sarcoplasmic reticulum: a normal mode analysis
- April 18, 2004 Interz0ne III Atlanta, GA Hacking the Genome: Designer Proteins, Elite Organisms, and You
- March 1, 2004 Harvey Lab FFT analysis of DNA sequences
- November 13, 2003 BIOL 8803 Bioinformatics Brief overview of genome sequencing
- November 11, 2003 Harvey Lab Poisson Boltzmann and the Double Helix
Thesis
My undergraduate thesis: Fast
Fourier Transform Analysis of DNA Sequences (2003). Most of the
material can be found elsewhere, but may be difficult to find or
interpret. Beware! some of the things I wrote are totally wrong.
Tools and Resources
Files, Links & Directions
- Ivan Zaigralin's MIT Logic Seminar talk notes May 13, 2009 < Logic2009Ivanstalk.txt.pdf >
- Berkman Center webcast questions April 28, 2009 "A Sneak Preview of Wolfram|Alpha: Computational Knowledge Engine" < WolframAlphaQ3questions.html.pdf >
- Ketan Mulmuley, On P vs NP, Geometric Complexity Theory, and the Riemann Hypothesis at Theory Colloquium 2008/2009 Mar. 10, 2009 < KetanMulmuley-GCT-3-10-2009.pdf >
- Program for workshop Dec. 1-2, 2007 "Trends in the mathematical representation of space" < Trends.txt, Abstracts.pdf >
- OSX X11 xmodmap file for apple and option keys < .xmodmap >
- Rotate and translate atoms in a PDB file in three dimensions < rotatepdb.pl >
- Get your money's worth from COMCAST internet < checkcomcastservice.pl >
- Here's a two-page vi reference card < viReferenceCardHP.pdf >
- Here's an eleven-page Word equation editor keyboard shortcut sheet < WordEquationEditor-keyboardshortcuts.pdf >
- Make a TiVO for ~$70 and a laptop with spare hard drive space < GrabBee X+ USB 2.0 Video Capture >
- Coming soon! how to make a (MD, etc.) simulation movie kiosk with USB video transmitting < MD Movie Kiosk >
- Video Cube - implements viewing time-series data in a continuous slab of time space < Video Cube >
- Facebook in the 80s: "The Electronic University", in Cohabiting with computers, Joseph F. Traub ed. 1985 < COHABCOMP-1985.pdf >
- Notes on BlackBerry 8100 ownership < rwh-bb-ownership.txt >
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Revised: 2009.03.20